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TOP > About the Species(Nicotiana tabacum var. TN90) > genome data >Gene sequences

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SNP Detection
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Data List

All Markers Trait-Related Loci
Nicotiana tabacum

CDS Sequence

CDS ID

lcl|NW_015832258.1_cds_XP_016504831.1_18228
CDS Infomation

[gene=LOC107822777] [db_xref=GeneID:107822777] [protein=2-dehydro-3-deoxyphosphooctonate aldolase 1] [protein_id=XP_016504831.1] [location=complement(join(39573..39629,40612..40659,40798..40845,41115..41213,54489..54533,54676..54734,55156..55240,55378..55452,55586..55645,56202..56267,56427..56523,56714..56811,56959..56994))] [gbkey=CDS]
Sequence

ATGGATTCCTCAACCCTGCTCTTCAACCAGCTCAAGACAGCAGAGCCATTTTTCTTACTA
GCAGGTCCCAATGTGATTGAATCAGAGGATCACATTCTTTACATGGCCAAGCACTTGAAG
GATACCACTTCTAAACTTGGATTGAAGTTTGTGTTCAAGTCGAGCTTCGACAAGGCTAAT
CGCACTTCCTCTAAATCATTTCGCGGTCCTGGCTTGGCCGAAGGCTTGAAGATCCTTGAA
AAGGTTAAAGCAACATATGATGTACCTATTGTTACTGATGTTCATGAATCTATTCAGTGT
GAAGCAGTTGGCCGGGTTGCAGATATAATTCAGATTCCTGCTTTCTTATGTCGGCAGACC
GACCTACTTGTCGCAGCTGCCAAGACTGGAAAAATTATCAACATTAAGAAGGGCCAGTTT
TGTGCTCCTTCAGTGATGGAAAATTCTGCTGAAAAAGTGAGATTGGCTGGAAATCAAAAT
GTCATGGTGTGTGAGAGAGGAACAATGTTTGGCTATAATGACTTGATTGTGGATCCCCGG
AACTTCGAGTGGATGAGGGAGGCCAATTGCCCTGTTGTGGCTGATATAACTCATTCATTA
CAACAGCCTGCAGGCAAAAAGCTGGAAGGTGGTGGTGTTGCCAGTGGCGGTCTTCGCGAA
TTAATTCCTTGTATTGCCAGGACAGCTGTTGCTGTGGGAGTAGATGGAATTTTTATGGAG
GTGCACAATGATCCCCTGAATGCTCCAGTTGACGGTCCAACACAGTGGCCTCTGCGCCAT
CTGGAGGAACTACTAGAAGAGCTTGTCACGATTGGTAGAGTTAGCAAGGGGAAGCAGCAA
TTCAAAATTGATCTCACTCCATTTCGTGATTAG

Peptide Sequence

PEP ID

XP_016504831.1
PEP Infomation

PREDICTED: 2-dehydro-3-deoxyphosphooctonate aldolase 1 [Nicotiana tabacum]
Sequence

MDSSTLLFNQLKTAEPFFLLAGPNVIESEDHILYMAKHLKDTTSKLGLKFVFKSSFDKAN
RTSSKSFRGPGLAEGLKILEKVKATYDVPIVTDVHESIQCEAVGRVADIIQIPAFLCRQT
DLLVAAAKTGKIINIKKGQFCAPSVMENSAEKVRLAGNQNVMVCERGTMFGYNDLIVDPR
NFEWMREANCPVVADITHSLQQPAGKKLEGGGVASGGLRELIPCIARTAVAVGVDGIFME
VHNDPLNAPVDGPTQWPLRHLEELLEELVTIGRVSKGKQQFKIDLTPFRD

Transcript Sequence

Gene sequence data has not been registered.